Transcript: ENSDART00000151596.2 IFT70A-201

Description

intraflagellar transport 70 [Source:ZFIN;Acc:ZDB-GENE-070117-2066]

Location

About this transcript

This transcript has 4 exons, is associated with 1 variant allele and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055422.6	IFT70A-203	2559	651aa	ENSDARP00000055421.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7YE96-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191294.1	IFT70A-204	5437	629aa	ENSDARP00000157401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184130.1	IFT70A-205	2004	667aa	ENSDARP00000147522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PYI9	-
ENSDART00000108973.3	IFT70A-202	2015	556aa	ENSDARP00000101646.2	Nonsense mediated decay	-	-
ENSDART00000151596.2	IFT70A-201	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 575 bps,

Version

ENSDART00000151596.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.