Transcript: ENSDART00000151593.3 ubl7b-205

Description

ubiquitin-like 7b (bone marrow stromal cell-derived) [Source:ZFIN;Acc:ZDB-GENE-040426-1334]

Gene Synonyms

ubl7, ubl7a, zgc:64009

Location

Chromosome 18: 50,523,870-50,529,757 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 285 variant alleles and maps to 58 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040286.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000098390.5	ubl7b-201	1236	365aa	ENSDARP00000089161.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T3A5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175194.2	ubl7b-207	2330	365aa	ENSDARP00000143702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T3A5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151593.3	ubl7b-205	804	173aa	ENSDARP00000125752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151374.3	ubl7b-204	1289	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151647.2	ubl7b-206	892	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150927.3	ubl7b-202	850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150954.2	ubl7b-203	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 804 bps, Translation length: 173 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151593.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000151593.3 ubl7b-205

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000151593.3 ubl7b-205

Summary

About Us

Get help

Our sister sites

Follow us