Transcript: ENSDART00000151568.2 eif3d-207

Description

eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]

Gene Synonyms

eif3s7, wu:fb12a03

Location

Chromosome 3: 29,640,994-29,654,697 forward strand.

About this transcript

This transcript has 8 exons, is associated with 11 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021257.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011052.9	eif3d-201	1811	552aa	ENSDARP00000011011.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TH15	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132298.3	eif3d-202	1892	550aa	ENSDARP00000116681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151517.2	eif3d-206	315	41aa	ENSDARP00000126163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151568.2	eif3d-207	823	60aa	ENSDARP00000126192.1	Nonsense mediated decay	-	-
ENSDART00000150898.2	eif3d-205	740	104aa	ENSDARP00000126265.1	Nonsense mediated decay	-	-
ENSDART00000143234.2	eif3d-204	683	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000139315.2	eif3d-203	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 3, Transcript length: 823 bps, Translation length: 60 residues

Version

ENSDART00000151568.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000151568.2 eif3d-207

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Transcript: ENSDART00000151568.2 eif3d-207

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