Transcript: ENSDART00000151536.2 gmnn-204

Description

geminin DNA replication inhibitor [Source:ZFIN;Acc:ZDB-GENE-030429-30]

Gene Synonyms

sb:cb254

Location

Chromosome 19: 31,587,931-31,590,491 forward strand.

About this transcript

This transcript has 5 exons, is associated with 259 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035957.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000052185.6	gmnn-201	1031	241aa	ENSDARP00000052184.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132182.2	gmnn-202	786	241aa	ENSDARP00000116365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181604.1	gmnn-205	582	194aa	ENSDARP00000154434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000151536.2	gmnn-204	808	81aa	ENSDARP00000125661.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000150910.2	gmnn-203	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 808 bps, Translation length: 81 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151536.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000151536.2 gmnn-204

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Transcript: ENSDART00000151536.2 gmnn-204

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