Transcript: ENSDART00000151411.3 gtf2f1-206

Description

ral transcription factor IIF, polypeptide 1 [Source:NCBI gene (formerly Entrezgene);Acc:325832]

Location

Chromosome 3: 33,922,387-33,934,788 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 311 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000032129.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000026090.9	gtf2f1-201	2281	536aa	ENSDARP00000009277.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB13AB08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000047660.5	gtf2f1-202	1913	443aa	ENSDARP00000047659.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000111878.4	gtf2f1-203	1901	443aa	ENSDARP00000103686.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151411.3	gtf2f1-206	1036	314aa	ENSDARP00000125649.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151211.2	gtf2f1-205	591	197aa	ENSDARP00000125934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000151475.2	gtf2f1-207	785	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151196.2	gtf2f1-204	624	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,036 bps, Translation length: 314 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151411.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151411.3 gtf2f1-206

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000151411.3 gtf2f1-206

Summary

About Us

Get help

Our sister sites

Follow us