Transcript: ENSDART00000151390.2 si:ch211-195b13.1-202

Description

si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]

Location

About this transcript

This transcript has 4 exons, is associated with 153 variant alleles and maps to 61 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000010580.9	si:ch211-195b13.1-201	2939	423aa	ENSDARP00000009591.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQ53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158490.2	si:ch211-195b13.1-203	1771	411aa	ENSDARP00000140169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX87	-
ENSDART00000151390.2	si:ch211-195b13.1-202	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 546 bps,

Version

ENSDART00000151390.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.