Transcript: ENSDART00000151359.2 kdm4aa-201

Description

lysine (K)-specific demethylase 4A, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-110609-4]

Location

About this transcript

This transcript has 22 exons, is annotated with 65 domains and features, is associated with 563 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151359.2	kdm4aa-201	6611	2012aa	ENSDARP00000126239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187407.1	kdm4aa-202	2562	853aa	ENSDARP00000145047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000191883.1	kdm4aa-204	2550	849aa	ENSDARP00000147843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000187444.1	kdm4aa-203	1230	409aa	ENSDARP00000157127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 6,611 bps, Translation length: 2,012 residues

Version

ENSDART00000151359.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.