Transcript: ENSDART00000151355.2 ptger1a-201

Description

prostaglandin E receptor 1a (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120215-261]

Location

About this transcript

This transcript has 4 exons, is annotated with 38 domains and features, is associated with 268 variant alleles and maps to 64 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189496.1	ptger1a-202	3490	373aa	ENSDARP00000157156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151355.2	ptger1a-201	1629	373aa	ENSDARP00000125736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIS8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 1,629 bps, Translation length: 373 residues

Version

ENSDART00000151355.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.