Transcript: ENSDART00000151348.2 csmd2-202

Description

CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]

Gene Synonyms

si:bz1c3.1

Location

About this transcript

This transcript has 2 exons, is associated with 325 variant alleles and maps to 3 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132471.4	csmd2-201	12344	3589aa	ENSDARP00000114742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186003.1	csmd2-203	945	314aa	ENSDARP00000155150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QIV1	-
ENSDART00000189743.1	csmd2-204	771	256aa	ENSDARP00000157039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QU27	-
ENSDART00000193856.1	csmd2-205	531	176aa	ENSDARP00000153091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QKX0	-
ENSDART00000151348.2	csmd2-202	308	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 308 bps,

Version

ENSDART00000151348.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.