Transcript: ENSDART00000151345.3 zgc:113162-203

Description

zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]

Location

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 423 variant alleles and maps to 50 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134347.4	zgc:113162-201	2762	331aa	ENSDARP00000122091.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSL0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151345.3	zgc:113162-203	876	213aa	ENSDARP00000126098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IT44	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151268.2	zgc:113162-202	528	24aa	ENSDARP00000126044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISZ3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 6, Transcript length: 876 bps, Translation length: 213 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151345.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.