Transcript: ENSDART00000151340.3 mmp25a-201

Description

matrix metallopeptidase 25a [Source:ZFIN;Acc:ZDB-GENE-070820-22]

Gene Synonyms

MMPLa, mmp25, si:ch73-248e21.6

Location

About this transcript

This transcript has 11 exons, is annotated with 35 domains and features, is associated with 293 variant alleles and maps to 65 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151340.3	mmp25a-201	1737	578aa	ENSDARP00000126081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IT28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,737 bps, Translation length: 578 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151340.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.