Transcript: ENSDART00000151293.3 znrf2a-203

Description

zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]

Gene Synonyms

zgc:171663

Location

Chromosome 19: 1,934,774-1,947,403 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 486 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077855.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113951.4	znrf2a-201	1183	181aa	ENSDARP00000104121.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000163344.2	znrf2a-204	1993	181aa	ENSDARP00000141500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKY5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000151293.3	znrf2a-203	900	184aa	ENSDARP00000125764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TCS4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000134074.2	znrf2a-202	819	169aa	ENSDARP00000125859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 900 bps, Translation length: 184 residues

Version

ENSDART00000151293.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000151293.3 znrf2a-203

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Transcript: ENSDART00000151293.3 znrf2a-203

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