Transcript: ENSDART00000151247.3 scn1lab-202

Description

sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]

Location

About this transcript

This transcript has 27 exons, is annotated with 115 domains and features, is associated with 1280 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151247.3	scn1lab-202	6477	1996aa	ENSDARP00000125843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXF5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000090994.4	scn1lab-201	5991	1996aa	ENSDARP00000085427.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXF5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 6,477 bps, Translation length: 1,996 residues

Version

ENSDART00000151247.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.