Transcript: ENSDART00000151228.2 stmn1a-203

Description

stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]

Gene Synonyms

cb959, stmn1, wu:fb14e04, zgc:136942

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 119 variant alleles and maps to 38 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007906.11	stmn1a-201	1083	148aa	ENSDARP00000023151.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RLQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164683.3	stmn1a-204	3914	163aa	ENSDARP00000133564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151228.2	stmn1a-203	221	51aa	ENSDARP00000125747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132662.3	stmn1a-202	839	73aa	ENSDARP00000125979.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 221 bps, Translation length: 51 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151228.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.