Transcript: ENSDART00000151200.2 mmp17a-201

Description

matrix metallopeptidase 17a [Source:ZFIN;Acc:ZDB-GENE-070820-2]

Gene Synonyms

mmp17

Location

About this transcript

This transcript has 9 exons, is annotated with 31 domains and features, is associated with 1444 variant alleles and maps to 71 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000178507.2	mmp17a-202	1725	574aa	ENSDARP00000144401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YB36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151200.2	mmp17a-201	1653	550aa	ENSDARP00000126006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISV9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,653 bps, Translation length: 550 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151200.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]