Transcript: ENSDART00000151165.2 TRIM46-201

Description

tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]

Location

About this transcript

This transcript has 12 exons, is annotated with 29 domains and features, is associated with 7 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151165.2	TRIM46-201	2768	739aa	ENSDARP00000125681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8B2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000081546.7	TRIM46-202	2220	739aa	ENSDARP00000075987.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8B2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,768 bps, Translation length: 739 residues

Version

ENSDART00000151165.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.