Transcript: ENSDART00000151131.2 TAF9-205

Description

TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]

Location

Chromosome 21: 38,728,867-38,730,597 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 233 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077870.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111885.4	TAF9-206	1041	248aa	ENSDARP00000098102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDT4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150984.2	TAF9-201	941	244aa	ENSDARP00000125853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151767.3	TAF9-203	699	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000151534.3	TAF9-202	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000151333.3	TAF9-204	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151131.2	TAF9-205	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 533 bps,

Version

ENSDART00000151131.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151131.2 TAF9-205

Summary

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Transcript: ENSDART00000151131.2 TAF9-205

Summary

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