Transcript: ENSDART00000151080.3 si:ch211-199g17.9-202

Description

si:ch211-199g17.9 [Source:ZFIN;Acc:ZDB-GENE-120214-17]

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 277 variant alleles and maps to 36 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110305.4	si:ch211-199g17.9-201	1669	206aa	ENSDARP00000099280.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DFT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151080.3	si:ch211-199g17.9-202	508	78aa	ENSDARP00000126015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISW7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151168.2	si:ch211-199g17.9-203	327	109aa	ENSDARP00000126102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IT47	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 508 bps, Translation length: 78 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151080.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.