Transcript: ENSDART00000151058.3 MED25-201

Description

mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]

Location

About this transcript

This transcript has 15 exons, is associated with 420 variant alleles and maps to 165 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055393.7	MED25-203	2722	701aa	ENSDARP00000055392.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0J2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151367.2	MED25-202	730	172aa	ENSDARP00000126306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151058.3	MED25-201	1954	149aa	ENSDARP00000125651.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 15, Coding exons: 6, Transcript length: 1,954 bps, Translation length: 149 residues

Version

ENSDART00000151058.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.