Transcript: ENSDART00000151057.3 RIN2-201

Description

si:ch211-85n16.4 [Source:ZFIN;Acc:ZDB-GENE-030131-7043]

Gene Synonyms

fk68e06, wu:fk68e06

Location

Chromosome 6: 6,822,592-6,845,993 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 696 variant alleles and maps to 97 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077040.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151057.3	RIN2-201	2475	824aa	ENSDARP00000125621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IRW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000181284.1	RIN2-203	1359	452aa	ENSDARP00000147053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q1P8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151343.2	RIN2-202	487	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,475 bps, Translation length: 824 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151057.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151057.3 RIN2-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000151057.3 RIN2-201

Summary

About Us

Get help

Our sister sites

Follow us