Transcript: ENSDART00000151041.2 zgc:152948-204

Description

zgc:152948 [Source:ZFIN;Acc:ZDB-GENE-060929-364]

Location

Chromosome 21: 1,630,394-1,640,547 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 7 variant alleles and maps to 73 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071487.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000105736.6	zgc:152948-201	2053	438aa	ENSDARP00000096514.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124904.4	zgc:152948-202	2051	438aa	ENSDARP00000110918.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151118.3	zgc:152948-205	932	239aa	ENSDARP00000125753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151041.2	zgc:152948-204	549	183aa	ENSDARP00000125850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000151258.3	zgc:152948-206	539	142aa	ENSDARP00000126128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000150978.2	zgc:152948-203	605	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 549 bps, Translation length: 183 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000151041.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

retained intron final [Definitions]

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Transcript: ENSDART00000151041.2 zgc:152948-204

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Transcript: ENSDART00000151041.2 zgc:152948-204

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