Transcript: ENSDART00000151031.2 ash1l-203

Description

ash1 (absent, small, or homeotic)-like (Drosophila) [Source:NCBI gene (formerly Entrezgene);Acc:563799]

Location

Chromosome 19: 9,050,852-9,058,005 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 234 variant alleles and maps to 25 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070981.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127755.5	ash1l-202	9919	2962aa	ENSDARP00000105655.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000052915.8	ash1l-201	12257	2988aa	ENSDARP00000052914.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2B6D3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000192298.1	ash1l-204	12179	2962aa	ENSDARP00000156563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY85	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151031.2	ash1l-203	776	259aa	ENSDARP00000126279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 776 bps, Translation length: 259 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000151031.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151031.2 ash1l-203

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Transcript: ENSDART00000151031.2 ash1l-203

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