Transcript: ENSDART00000151024.3 osbpl3a-203

Description

oxysterol binding protein-like 3a [Source:ZFIN;Acc:ZDB-GENE-040912-77]

Gene Synonyms

osbpl3, zgc:101089

Location

Chromosome 19: 19,988,869-20,008,775 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 21 variant alleles and maps to 6 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000033251.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142841.3	osbpl3a-201	3303	813aa	ENSDARP00000119460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LW95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151024.3	osbpl3a-203	315	64aa	ENSDARP00000126103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151066.2	osbpl3a-204	623	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000150925.2	osbpl3a-202	663	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151734.2	osbpl3a-205	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 315 bps, Translation length: 64 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151024.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000151024.3 osbpl3a-203

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Transcript: ENSDART00000151024.3 osbpl3a-203

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