Transcript: ENSDART00000150846.2 rnaseh2a-202

Description

ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]

Gene Synonyms

zgc:56307

Location

About this transcript

This transcript has 7 exons, is associated with 276 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000045894.7	rnaseh2a-201	1302	307aa	ENSDARP00000045893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TNR0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190574.1	rnaseh2a-203	1089	307aa	ENSDARP00000155352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TNR0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150846.2	rnaseh2a-202	787	71aa	ENSDARP00000125360.1	Nonsense mediated decay	H0WET2	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 787 bps, Translation length: 71 residues

Version

ENSDART00000150846.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.