Transcript: ENSDART00000150794.2 PLEKHA5-202

Description

pleckstrin homology domain containing, family A member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-25]

Location

Chromosome 4: 2,963,055-2,975,461 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 2 domains and features, is associated with 41 variant alleles and maps to 30 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045870.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112210.4	PLEKHA5-205	4539	1238aa	ENSDARP00000099969.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8A2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127894.4	PLEKHA5-204	4358	1172aa	ENSDARP00000105373.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141952.4	PLEKHA5-203	750	250aa	ENSDARP00000120559.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000150794.2	PLEKHA5-202	556	185aa	ENSDARP00000125254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000135701.2	PLEKHA5-201	532	84aa	ENSDARP00000114017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 556 bps, Translation length: 185 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000150794.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000150794.2 PLEKHA5-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000150794.2 PLEKHA5-202

Summary

About Us

Get help

Our sister sites

Follow us