Transcript: ENSDART00000150775.2 taar20o-201

Description

trace amine associated receptor 20o [Source:ZFIN;Acc:ZDB-GENE-060414-4]

Gene Synonyms

si:dkey-181m19.7, taar42, zTA42

Location

About this transcript

This transcript has 1 exon, is annotated with 22 domains and features, is associated with 424 variant alleles and maps to 145 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156420.3	taar20o-202	1062	353aa	ENSDARP00000127942.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000150775.2	taar20o-201	1053	350aa	ENSDARP00000125597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WFG5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,053 bps, Translation length: 350 residues

Version

ENSDART00000150775.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.