Transcript: ENSDART00000150746.3 zgc:173709-201

Description

zgc:173709 [Source:ZFIN;Acc:ZDB-GENE-080208-5]

Location

About this transcript

This transcript has 13 exons, is annotated with 68 domains and features, is associated with 359 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150746.3	zgc:173709-201	4412	1310aa	ENSDARP00000125566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183761.1	zgc:173709-203	5172	228aa	ENSDARP00000154589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185921.1	zgc:173709-204	2810	693aa	ENSDARP00000156631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190248.1	zgc:173709-205	2425	759aa	ENSDARP00000146475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190750.1	zgc:173709-206	2221	693aa	ENSDARP00000153506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000157941.2	zgc:173709-202	1784	383aa	ENSDARP00000131578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8KBM3	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 4,412 bps, Translation length: 1,310 residues

Version

ENSDART00000150746.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.