Transcript: ENSDART00000150587.2 asb13a.1-204

Description

ankyrin repeat and SOCS box containing 13a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-261]

Gene Synonyms

asb13, asb13a, zgc:92919

Location

Chromosome 4: 11,479,758-11,483,190 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 31 domains and features, is associated with 213 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079698.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000019458.9	asb13a.1-201	1411	286aa	ENSDARP00000021675.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGH5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000150587.2	asb13a.1-204	1592	315aa	ENSDARP00000125456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WF25	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000135826.2	asb13a.1-202	1472	112aa	ENSDARP00000125290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WEL2	-
ENSDART00000139370.3	asb13a.1-203	712	137aa	ENSDARP00000125569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WFD7	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,592 bps, Translation length: 315 residues

Version

ENSDART00000150587.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000150587.2 asb13a.1-204

Summary

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Transcript: ENSDART00000150587.2 asb13a.1-204

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