Transcript: ENSDART00000150564.3 TDO2-202

Description

tryptophan 2,3-dioxygenase a [Source:ZFIN;Acc:ZDB-GENE-030131-1187]

Location

Chromosome 14: 36,738,067-36,747,962 forward strand.

About this transcript

This transcript has 9 exons, is associated with 456 variant alleles and maps to 50 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071429.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105590.6	TDO2-203	1552	406aa	ENSDARP00000096367.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MBU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150564.3	TDO2-202	892	56aa	ENSDARP00000125470.1	Nonsense mediated decay	-	-
ENSDART00000150454.3	TDO2-204	747	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000150731.2	TDO2-205	1442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150458.3	TDO2-201	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150729.2	TDO2-206	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 3, Transcript length: 892 bps, Translation length: 56 residues

Version

ENSDART00000150564.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000150564.3 TDO2-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000150564.3 TDO2-202

Summary

About Us

Get help

Our sister sites

Follow us