Transcript: ENSDART00000150395.3 zgc:173705-202

Description

zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]

Location

About this transcript

This transcript has 3 exons, is annotated with 60 domains and features, is associated with 29 variant alleles and maps to 172 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150395.3	zgc:173705-202	1905	359aa	ENSDARP00000125583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132945.3	zgc:173705-201	1080	359aa	ENSDARP00000116199.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCD4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,905 bps, Translation length: 359 residues

Version

ENSDART00000150395.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.