Transcript: ENSDART00000150389.2 TMEM168-201

Description

transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]

Location

About this transcript

This transcript has 5 exons, is annotated with 36 domains and features, is associated with 676 variant alleles and maps to 159 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150389.2	TMEM168-201	2251	681aa	ENSDARP00000125427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184175.1	TMEM168-202	2123	681aa	ENSDARP00000153111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUD1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,251 bps, Translation length: 681 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1LUD1

Version

ENSDART00000150389.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.