Transcript: ENSDART00000150376.2 LDB1-203

Description

LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]

Location

About this transcript

This transcript has 11 exons, is annotated with 6 domains and features, is associated with 336 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000015773.10	LDB1-202	2276	374aa	ENSDARP00000003158.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O73715-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183338.1	LDB1-204	5819	352aa	ENSDARP00000153482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RV37	-
ENSDART00000150376.2	LDB1-203	2986	315aa	ENSDARP00000125601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132444.2	LDB1-201	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,986 bps, Translation length: 315 residues

Version

ENSDART00000150376.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.