Transcript: ENSDART00000150364.2 LRRC56-201

Description

leucine rich repeat containing 56 [Source:ZFIN;Acc:ZDB-GENE-081223-1]

Location

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 38 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161369.2	LRRC56-202	2783	607aa	ENSDARP00000130756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3APS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150364.2	LRRC56-201	1248	416aa	ENSDARP00000125568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,248 bps, Translation length: 416 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000150364.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.