Transcript: ENSDART00000150344.2 cog5-202

Description

component of oligomeric golgi complex 5 [Source:ZFIN;Acc:ZDB-GENE-041210-47]

Location

Chromosome 4: 2,629,776-2,637,710 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 374 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000008235.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150344.2	cog5-202	1317	165aa	ENSDARP00000125591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000021953.11	cog5-201	3027	809aa	ENSDARP00000019903.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NMG5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000192550.1	cog5-203	3009	810aa	ENSDARP00000150497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RQB0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,317 bps, Translation length: 165 residues

Version

ENSDART00000150344.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000150344.2 cog5-202

Summary

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Transcript: ENSDART00000150344.2 cog5-202

Summary

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