Transcript: ENSDART00000150095.2 MAPK1-203

Description

mitogen-activated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-2]

Gene Synonyms

zERK2

Location

Chromosome 5: 13,110,935-13,120,593 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 480 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000027552.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000030213.6	MAPK1-201	1641	369aa	ENSDARP00000038550.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149700.2	MAPK1-202	1411	369aa	ENSDARP00000123916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150095.2	MAPK1-203	607	99aa	ENSDARP00000124354.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000149440.2	MAPK1-204	904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 607 bps, Translation length: 99 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000150095.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000150095.2 MAPK1-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000150095.2 MAPK1-203

Summary

About Us

Get help

Our sister sites

Follow us