Transcript: ENSDART00000150086.2 ODR4-201

Description

odr-4 GPCR localization factor homolog [Source:ZFIN;Acc:ZDB-GENE-080502-1]

Location

About this transcript

This transcript has 14 exons, is annotated with 7 domains and features, is associated with 415 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062591.7	ODR4-202	1362	453aa	ENSDARP00000062590.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1PHG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000150086.2	ODR4-201	1659	451aa	ENSDARP00000124890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 1,659 bps, Translation length: 451 residues

Version

ENSDART00000150086.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.