Transcript: ENSDART00000150052.3 eif3eb-204

Description

eukaryotic translation initiation factor 3, subunit E, b [Source:NCBI gene (formerly Entrezgene);Acc:561049]

Location

Chromosome 19: 22,624,336-22,648,963 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 246 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000002549.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023926.11	eif3eb-201	3883	446aa	ENSDARP00000003276.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHS3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000136295.4	eif3eb-203	1679	439aa	ENSDARP00000120794.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000135651.3	eif3eb-202	1895	401aa	ENSDARP00000118894.1	Nonsense mediated decay	Z4YIU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000150189.2	eif3eb-205	754	63aa	ENSDARP00000123842.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000150052.3	eif3eb-204	697	91aa	ENSDARP00000124720.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 697 bps, Translation length: 91 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000150052.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000150052.3 eif3eb-204

Summary

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Transcript: ENSDART00000150052.3 eif3eb-204

Summary

About Us

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