Transcript: ENSDART00000149960.2 FASN-202

Description

coiled-coil domain containing 57 [Source:ZFIN;Acc:ZDB-GENE-090603-1]

Location

Chromosome 12: 33,396,489-33,404,086 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 24 variant alleles and maps to 11 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087657.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129458.3	FASN-201	10042	2511aa	ENSDARP00000112100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F5V3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124982.4	FASN-205	8323	1022aa	ENSDARP00000104714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EY31	-
ENSDART00000124083.3	FASN-206	7536	2511aa	ENSDARP00000105444.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F5V3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149960.2	FASN-202	281	51aa	ENSDARP00000124028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000185053.1	FASN-204	171	57aa	ENSDARP00000149024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000149644.2	FASN-203	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 281 bps, Translation length: 51 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149960.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149960.2 FASN-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000149960.2 FASN-202

Summary

About Us

Get help

Our sister sites

Follow us