Transcript: ENSDART00000149956.3 APC-201

Description

APC regulator of WNT signaling pathway [Source:ZFIN;Acc:ZDB-GENE-031112-7]

Location

About this transcript

This transcript has 15 exons, is annotated with 126 domains and features, is associated with 735 variant alleles and maps to 296 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158897.2	APC-202	8265	2754aa	ENSDARP00000139275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000149956.3	APC-201	9187	2745aa	ENSDARP00000123835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2B1L0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 9,187 bps, Translation length: 2,745 residues

Version

ENSDART00000149956.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]