Transcript: ENSDART00000149945.2 RPS10-203

Description

ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]

Location

Chromosome 6: 54,177,462-54,180,516 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 111 variant alleles and maps to 183 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000034897.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000045901.8	RPS10-201	708	166aa	ENSDARP00000045900.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T1J9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164283.2	RPS10-204	539	166aa	ENSDARP00000134332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T1J9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149945.2	RPS10-203	309	68aa	ENSDARP00000124639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149468.2	RPS10-202	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 309 bps, Translation length: 68 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149945.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149945.2 RPS10-203

Summary

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Transcript: ENSDART00000149945.2 RPS10-203

Summary

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