Transcript: ENSDART00000149935.2 nt5c3a-204

Description

5'-nucleotidase, cytosolic IIIA [Source:NCBI gene;Acc:321720]

Gene Synonyms

fb30h07, nt5c3, wu:fb30h07, zgc:66117

Location

Chromosome 16: 7,219,992-7,228,279 reverse strand.

About this transcript

This transcript has 8 exons, is associated with 277 variant alleles and maps to 58 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058597.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149260.3	nt5c3a-203	1826	331aa	ENSDARP00000124641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2Q8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187916.1	nt5c3a-205	4285	285aa	ENSDARP00000151921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QBD3	-
ENSDART00000148992.3	nt5c3a-201	1256	367aa	ENSDARP00000124389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3F7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149030.3	nt5c3a-202	853	155aa	ENSDARP00000124279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W416	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000149935.2	nt5c3a-204	601	147aa	ENSDARP00000124742.1	Nonsense mediated decay	F8W2G1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 601 bps, Translation length: 147 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000149935.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149935.2 nt5c3a-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000149935.2 nt5c3a-204

Summary

About Us

Get help

Our sister sites

Follow us