Transcript: ENSDART00000149923.2 MYOM1-201

Description

myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]

Location

Chromosome 2: 30,948,503-30,953,078 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 288 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061249.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137012.4	MYOM1-204	5891	1483aa	ENSDARP00000117418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NUG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149923.2	MYOM1-201	748	249aa	ENSDARP00000123955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149721.2	MYOM1-205	924	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000132450.3	MYOM1-203	415	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000131606.3	MYOM1-202	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 748 bps, Translation length: 249 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000149923.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149923.2 MYOM1-201

Summary

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Transcript: ENSDART00000149923.2 MYOM1-201

Summary

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