Transcript: ENSDART00000149878.2 otud4-202

Description

OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]

Gene Synonyms

parp11, wu:fd14a11, wu:fe11h08, zgc:165536

Location

About this transcript

This transcript has 10 exons, is annotated with 21 domains and features, is associated with 407 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112598.4	otud4-201	5081	1358aa	ENSDARP00000098303.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHE7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149878.2	otud4-202	3959	1066aa	ENSDARP00000124004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3X0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,959 bps, Translation length: 1,066 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000149878.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.