Transcript: ENSDART00000149860.3 alkal1-203

Description

ALK and LTK ligand 1 [Source:ZFIN;Acc:ZDB-GENE-110411-243]

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 837 variant alleles and maps to 80 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110571.4	alkal1-201	2493	170aa	ENSDARP00000099961.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000149860.3	alkal1-203	819	152aa	ENSDARP00000124157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2C9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148958.3	alkal1-202	755	152aa	ENSDARP00000124774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2C9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 819 bps, Translation length: 152 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F8W2C9

Version

ENSDART00000149860.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.