Transcript: ENSDART00000149844.2 cd74a-202

Description

CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]

Gene Synonyms

Iclp-1, MHC II, iclp1, wu:fb11f09, wu:fb12a01, wu:fb13d06, wu:fk94e07

Location

About this transcript

This transcript has 6 exons, is associated with 469 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000026021.8	cd74a-201	1273	237aa	ENSDARP00000002547.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9PUT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150000.2	cd74a-203	840	171aa	ENSDARP00000124682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2L8	-
ENSDART00000149844.2	cd74a-202	534	48aa	ENSDARP00000124614.1	Nonsense mediated decay	F8W2T5	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 534 bps, Translation length: 48 residues

Version

ENSDART00000149844.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.