Transcript: ENSDART00000149842.3

Description

si:ch1073-157b13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-13]

Location

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 530 variant alleles and maps to 292 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130147.4	-	6168	634aa	ENSDARP00000107304.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5Z5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000149842.3	-	2784	629aa	ENSDARP00000123928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4M0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000051907.7	-	2173	629aa	ENSDARP00000051906.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4M0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,784 bps, Translation length: 629 residues

Version

ENSDART00000149842.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.