Transcript: ENSDART00000149788.2 setx-202

Description

senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]

Location

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 377 variant alleles and maps to 38 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149777.3	setx-201	7237	2368aa	ENSDARP00000124379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N7UR12	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181345.1	setx-203	6723	2240aa	ENSDARP00000145955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000149788.2	setx-202	882	294aa	ENSDARP00000124613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 882 bps, Translation length: 294 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000149788.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.