Transcript: ENSDART00000149716.2 rasa1a-204

Description

RAS p21 protein activator (GTPase activating protein) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4694]

Gene Synonyms

fd52c05, rasa1, si:dkey-195m1.3, wu:fd52c05

Location

Chromosome 5: 47,945,874-47,950,012 forward strand.

About this transcript

This transcript has 3 exons, is associated with 28 variant alleles and maps to 18 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035535.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051518.7	rasa1a-201	3033	1010aa	ENSDARP00000051517.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3X3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000139824.4	rasa1a-202	4309	995aa	ENSDARP00000123559.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NI34	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000149316.2	rasa1a-203	578	103aa	ENSDARP00000124694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2K7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149716.2	rasa1a-204	667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 667 bps,

Version

ENSDART00000149716.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149716.2 rasa1a-204

Summary

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Transcript: ENSDART00000149716.2 rasa1a-204

Summary

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