Transcript: ENSDART00000149656.3 EDEM2-202

Description

ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]

Location

About this transcript

This transcript has 5 exons, is associated with 14 variant alleles and maps to 51 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169965.3	EDEM2-204	3947	560aa	ENSDARP00000130442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IAP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000033774.8	EDEM2-201	1927	558aa	ENSDARP00000037677.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000149656.3	EDEM2-202	568	74aa	ENSDARP00000125108.1	Nonsense mediated decay	-	-
ENSDART00000149686.2	EDEM2-203	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 568 bps, Translation length: 74 residues

Version

ENSDART00000149656.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.