Transcript: ENSDART00000149645.3 rxfp2b-204

Description

relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]

Gene Synonyms

rxfp2a, si:dkey-1o1.1

Location

About this transcript

This transcript has 18 exons, is associated with 1263 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149137.2	rxfp2b-203	2510	750aa	ENSDARP00000125030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5N7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185681.1	rxfp2b-205	1443	473aa	ENSDARP00000145627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBX9	-
ENSDART00000149645.3	rxfp2b-204	2523	473aa	ENSDARP00000124095.1	Nonsense mediated decay	F1RBX9	-
ENSDART00000148811.2	rxfp2b-201	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149023.3	rxfp2b-202	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 18, Coding exons: 16, Transcript length: 2,523 bps, Translation length: 473 residues

Version

ENSDART00000149645.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.